Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 AC141257.4-201ENST00000634557 245 ntBASIC16.56■□□□□ 0.24
LRRC58Q96CX6 AC136944.6-201ENST00000634818 245 ntBASIC16.56■□□□□ 0.24
LRRC58Q96CX6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 AC006449.5-201ENST00000610658 2098 ntBASIC16.56■□□□□ 0.24
LRRC58Q96CX6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.56■□□□□ 0.24
LRRC58Q96CX6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 SNORA78-201ENST00000459373 127 ntBASIC16.55■□□□□ 0.24
LRRC58Q96CX6 AC068472.1-201ENST00000474589 881 ntBASIC16.55■□□□□ 0.24
LRRC58Q96CX6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 AC124947.2-201ENST00000547118 1133 ntBASIC16.55■□□□□ 0.24
LRRC58Q96CX6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 LINC02199-201ENST00000506655 2702 ntBASIC16.55■□□□□ 0.24
LRRC58Q96CX6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRRC58Q96CX6 AL162727.3-201ENST00000635661 2787 ntBASIC16.55■□□□□ 0.24
LRRC58Q96CX6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 MMP23A-201ENST00000234610 1017 ntBASIC16.54■□□□□ 0.24
LRRC58Q96CX6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 COX5BP2-201ENST00000392354 334 ntBASIC16.54■□□□□ 0.24
LRRC58Q96CX6 TSPY15P-201ENST00000457163 923 ntBASIC16.54■□□□□ 0.24
LRRC58Q96CX6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.54■□□□□ 0.24
LRRC58Q96CX6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRRC58Q96CX6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms