Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 TSSK5P-201ENST00000423978 907 ntBASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM43Q96BQ3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 U91328.1-201ENST00000437528 223 ntBASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 AL590560.3-201ENST00000623350 461 ntBASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM43Q96BQ3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 AC100757.3-201ENST00000622361 1406 ntBASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 AC027369.6-201ENST00000525520 931 ntBASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 AP000842.3-202ENST00000569238 1080 ntBASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM43Q96BQ3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 MIR346-201ENST00000362234 95 ntBASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 AC004233.3-201ENST00000607794 1269 ntBASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM43Q96BQ3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM43Q96BQ3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms