Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HPS1Q92902 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HPS1Q92902 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HPS1Q92902 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HPS1Q92902 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HPS1Q92902 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.98■□□□□ 0.15
HPS1Q92902 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 AC007950.2-201ENST00000615045 2347 ntBASIC15.97■□□□□ 0.15
HPS1Q92902 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 AC026691.1-201ENST00000602502 2017 ntBASIC15.97■□□□□ 0.15
HPS1Q92902 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HPS1Q92902 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.97■□□□□ 0.15
HPS1Q92902 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 KRT8P3-201ENST00000519669 1449 ntBASIC15.97■□□□□ 0.15
HPS1Q92902 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.97■□□□□ 0.15
HPS1Q92902 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.97■□□□□ 0.15
HPS1Q92902 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.97■□□□□ 0.15
HPS1Q92902 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
HPS1Q92902 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 HOMER2P1-201ENST00000455653 964 ntBASIC15.97■□□□□ 0.15
HPS1Q92902 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.97■□□□□ 0.15
HPS1Q92902 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.97■□□□□ 0.15
HPS1Q92902 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.97■□□□□ 0.15
HPS1Q92902 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.97■□□□□ 0.15
HPS1Q92902 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 FLJ13224-201ENST00000313737 1514 ntBASIC15.97■□□□□ 0.15
HPS1Q92902 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HPS1Q92902 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.97■□□□□ 0.15
HPS1Q92902 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HPS1Q92902 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.96■□□□□ 0.15
HPS1Q92902 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HPS1Q92902 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.96■□□□□ 0.15
HPS1Q92902 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.96■□□□□ 0.15
HPS1Q92902 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.96■□□□□ 0.15
HPS1Q92902 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HPS1Q92902 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.96■□□□□ 0.15
HPS1Q92902 AP000523.1-201ENST00000398242 1049 ntBASIC15.96■□□□□ 0.15
HPS1Q92902 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.96■□□□□ 0.15
HPS1Q92902 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.96■□□□□ 0.15
HPS1Q92902 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.96■□□□□ 0.15
HPS1Q92902 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.96■□□□□ 0.15
HPS1Q92902 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HPS1Q92902 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HPS1Q92902 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HPS1Q92902 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.96■□□□□ 0.14
HPS1Q92902 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HPS1Q92902 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
HPS1Q92902 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
HPS1Q92902 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms