Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTF1Q92541 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RTF1Q92541 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RTF1Q92541 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.64■■□□□ 1.21
RTF1Q92541 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTF1Q92541 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.63■■□□□ 1.21
RTF1Q92541 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTF1Q92541 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTF1Q92541 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
RTF1Q92541 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
RTF1Q92541 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RTF1Q92541 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 KRT18P2-201ENST00000447938 1258 ntBASIC22.63■■□□□ 1.21
RTF1Q92541 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.63■■□□□ 1.21
RTF1Q92541 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.63■■□□□ 1.21
RTF1Q92541 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RTF1Q92541 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTF1Q92541 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTF1Q92541 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTF1Q92541 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC22.63■■□□□ 1.21
RTF1Q92541 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RTF1Q92541 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.62■■□□□ 1.21
RTF1Q92541 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RTF1Q92541 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.62■■□□□ 1.21
RTF1Q92541 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.62■■□□□ 1.21
RTF1Q92541 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RTF1Q92541 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.62■■□□□ 1.21
RTF1Q92541 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.62■■□□□ 1.21
RTF1Q92541 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RTF1Q92541 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.62■■□□□ 1.21
RTF1Q92541 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.62■■□□□ 1.21
RTF1Q92541 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.62■■□□□ 1.21
RTF1Q92541 RIN3-211ENST00000557762 517 ntTSL 3 BASIC22.62■■□□□ 1.21
RTF1Q92541 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.62■■□□□ 1.21
RTF1Q92541 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
RTF1Q92541 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.62■■□□□ 1.21
RTF1Q92541 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTF1Q92541 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC22.62■■□□□ 1.21
RTF1Q92541 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RTF1Q92541 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
RTF1Q92541 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
RTF1Q92541 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 AC023274.1-201ENST00000418278 595 ntBASIC22.61■■□□□ 1.21
RTF1Q92541 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RTF1Q92541 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.61■■□□□ 1.21
RTF1Q92541 CIPC-205ENST00000555437 566 ntTSL 3 BASIC22.61■■□□□ 1.21
RTF1Q92541 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.61■■□□□ 1.21
RTF1Q92541 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.61■■□□□ 1.21
RTF1Q92541 AC010654.1-201ENST00000615722 808 ntBASIC22.61■■□□□ 1.21
RTF1Q92541 AC139530.3-201ENST00000620344 690 ntBASIC22.61■■□□□ 1.21
RTF1Q92541 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.61■■□□□ 1.21
RTF1Q92541 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
RTF1Q92541 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RTF1Q92541 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RTF1Q92541 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTF1Q92541 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.61■■□□□ 1.21
RTF1Q92541 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.61■■□□□ 1.21
RTF1Q92541 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC22.6■■□□□ 1.21
RTF1Q92541 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC22.6■■□□□ 1.21
RTF1Q92541 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.6■■□□□ 1.21
RTF1Q92541 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RTF1Q92541 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTF1Q92541 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
RTF1Q92541 MIR1233-2-201ENST00000408138 82 ntBASIC22.6■■□□□ 1.21
RTF1Q92541 MIR1233-1-201ENST00000408722 82 ntBASIC22.6■■□□□ 1.21
RTF1Q92541 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.6■■□□□ 1.21
RTF1Q92541 ATP6V0CP3-201ENST00000417255 467 ntBASIC22.6■■□□□ 1.21
RTF1Q92541 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.6■■□□□ 1.21
RTF1Q92541 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms