Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.67□□□□□ -0.06
RTN4IP1Q8WWV3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 LINC01311-201ENST00000565162 1445 ntBASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 AC060834.1-201ENST00000443027 2032 ntBASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 NFIC-211ENST00000641145 8399 ntBASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RTN4IP1Q8WWV3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
RTN4IP1Q8WWV3 ZNF444P1-201ENST00000559497 298 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms