Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
C3orf56Q8N813 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.58□□□□□ -0.23
C3orf56Q8N813 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.58□□□□□ -0.23
C3orf56Q8N813 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.58□□□□□ -0.23
C3orf56Q8N813 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
C3orf56Q8N813 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 AC002056.1-201ENST00000395613 760 ntBASIC13.58□□□□□ -0.24
C3orf56Q8N813 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 SPDYE11-202ENST00000450699 704 ntBASIC13.58□□□□□ -0.24
C3orf56Q8N813 AL513480.1-201ENST00000451731 511 ntBASIC13.58□□□□□ -0.24
C3orf56Q8N813 IGHV3-42-201ENST00000520410 361 ntBASIC13.58□□□□□ -0.24
C3orf56Q8N813 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 SPDYE9P-201ENST00000570642 692 ntBASIC13.58□□□□□ -0.24
C3orf56Q8N813 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 AC026120.1-201ENST00000611536 926 ntBASIC13.58□□□□□ -0.24
C3orf56Q8N813 SPDYE10P-202ENST00000612005 668 ntBASIC13.58□□□□□ -0.24
C3orf56Q8N813 SPDYE8P-202ENST00000612377 668 ntBASIC13.58□□□□□ -0.24
C3orf56Q8N813 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
C3orf56Q8N813 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
C3orf56Q8N813 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 STK19B-204ENST00000512515 211 ntBASIC13.57□□□□□ -0.24
C3orf56Q8N813 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 TUBB3P1-201ENST00000405796 1332 ntBASIC13.57□□□□□ -0.24
C3orf56Q8N813 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 AC006116.8-202ENST00000587620 1550 ntBASIC13.57□□□□□ -0.24
C3orf56Q8N813 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
C3orf56Q8N813 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.57□□□□□ -0.24
C3orf56Q8N813 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms