Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC025678.2-201ENST00000562061 970 ntBASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC004449.1-201ENST00000564240 433 ntBASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC068137.2-201ENST00000605408 478 ntBASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC105339.1-204ENST00000636249 355 ntBASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNPOQ8N3V7 AL121761.2-201ENST00000598007 1648 ntBASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 PI4KAP1-204ENST00000612579 1703 ntBASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 AL096828.2-201ENST00000567259 1965 ntBASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 HLA-J-203ENST00000494367 1087 ntBASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 AC093028.1-201ENST00000622998 982 ntBASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 AC092902.6-201ENST00000641783 218 ntBASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SYNPOQ8N3V7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 AL096865.1-201ENST00000606796 927 ntBASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNPOQ8N3V7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 AL139400.1-201ENST00000366220 510 ntBASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.59■□□□□ 0.41
SYNPOQ8N3V7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms