Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 FLJ13224-201ENST00000313737 1514 ntBASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 ADH5P3-201ENST00000433842 1137 ntBASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 AC004449.1-201ENST00000564240 433 ntBASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NPAS3Q8IXF0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 HLA-J-203ENST00000494367 1087 ntBASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 SPCS2P1-201ENST00000561636 679 ntBASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPAS3Q8IXF0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.89■□□□□ 0.46
NPAS3Q8IXF0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
NPAS3Q8IXF0 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 AC087163.2-201ENST00000457299 853 ntBASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 AC023141.5-201ENST00000458585 616 ntBASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 AC112191.1-201ENST00000523689 701 ntBASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 AC093512.1-201ENST00000617969 520 ntBASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 AC138932.1-201ENST00000534164 6830 ntBASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
NPAS3Q8IXF0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms