Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCUBE3Q8IX30 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 AC016396.2-201ENST00000562575 1417 ntBASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 AC021087.4-201ENST00000563761 564 ntBASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 MTDHP4-201ENST00000600287 670 ntBASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 AC104692.2-201ENST00000603054 253 ntBASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 TP73-AS1-207ENST00000624167 988 ntBASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 AL022326.1-202ENST00000641533 845 ntBASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCUBE3Q8IX30 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCUBE3Q8IX30 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCUBE3Q8IX30 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.27■□□□□ 0.51
SCUBE3Q8IX30 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCUBE3Q8IX30 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.27■□□□□ 0.51
SCUBE3Q8IX30 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SCUBE3Q8IX30 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 FAM197Y8-203ENST00000450145 560 ntBASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 AC064862.7-201ENST00000604520 867 ntBASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 AC097637.2-201ENST00000624096 1997 ntBASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE3Q8IX30 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 AC012313.1-201ENST00000593393 3059 ntBASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 AL023806.1-201ENST00000603994 1649 ntBASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 AL022342.1-201ENST00000400363 863 ntBASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms