Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RAB43Q86YS6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.64■□□□□ 0.26
RAB43Q86YS6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RAB43Q86YS6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 OR7E14P-202ENST00000530490 1290 ntBASIC16.64■□□□□ 0.25
RAB43Q86YS6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 AC106730.1-201ENST00000566722 1090 ntBASIC16.64■□□□□ 0.25
RAB43Q86YS6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 CROCCP1-201ENST00000426910 5675 ntBASIC16.64■□□□□ 0.25
RAB43Q86YS6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB43Q86YS6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB43Q86YS6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 HLA-J-201ENST00000462773 1622 ntBASIC16.63■□□□□ 0.25
RAB43Q86YS6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 AC132938.6-201ENST00000623828 1655 ntBASIC16.63■□□□□ 0.25
RAB43Q86YS6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 AC007967.3-201ENST00000434308 558 ntBASIC16.63■□□□□ 0.25
RAB43Q86YS6 RPL13AP23-201ENST00000480739 586 ntBASIC16.63■□□□□ 0.25
RAB43Q86YS6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 AL049840.3-201ENST00000602669 611 ntBASIC16.63■□□□□ 0.25
RAB43Q86YS6 AL671883.3-201ENST00000603274 991 ntBASIC16.63■□□□□ 0.25
RAB43Q86YS6 AC006538.3-201ENST00000612495 578 ntBASIC16.63■□□□□ 0.25
RAB43Q86YS6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB43Q86YS6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB43Q86YS6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms