Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 PKD1P1-201ENST00000458669 6805 ntBASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 AL121894.2-201ENST00000602977 491 ntBASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB11FIP4Q86YS3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB11FIP4Q86YS3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB11FIP4Q86YS3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB11FIP4Q86YS3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB11FIP4Q86YS3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAB11FIP4Q86YS3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB11FIP4Q86YS3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 AC009336.1-201ENST00000608941 1553 ntBASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 AC008608.2-201ENST00000606089 416 ntBASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 REXO1L6P-202ENST00000619970 1078 ntBASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB11FIP4Q86YS3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 AL023806.1-201ENST00000603994 1649 ntBASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 AL450487.1-201ENST00000426799 995 ntBASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 AC079781.3-201ENST00000449110 356 ntBASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 SART3-203ENST00000546611 1184 ntBASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 AL691432.3-201ENST00000621860 400 ntBASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 OR6D1P-202ENST00000641007 5290 ntBASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB11FIP4Q86YS3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RAB11FIP4Q86YS3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms