Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 NEFHP1-201ENST00000412845 2629 ntBASIC19.35■□□□□ 0.69
TRIM50Q86XT4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 AP002414.1-201ENST00000391405 1147 ntBASIC19.35■□□□□ 0.69
TRIM50Q86XT4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.35■□□□□ 0.69
TRIM50Q86XT4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 ALG1L5P-201ENST00000482043 771 ntBASIC19.35■□□□□ 0.69
TRIM50Q86XT4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 AC010507.1-201ENST00000633895 436 ntBASIC19.35■□□□□ 0.69
TRIM50Q86XT4 AC134684.3-201ENST00000641758 218 ntBASIC19.35■□□□□ 0.69
TRIM50Q86XT4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
TRIM50Q86XT4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 MRPL20P1-201ENST00000400819 433 ntBASIC19.34■□□□□ 0.69
TRIM50Q86XT4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 AC004967.1-201ENST00000453589 447 ntBASIC19.34■□□□□ 0.69
TRIM50Q86XT4 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 AC010654.1-201ENST00000615722 808 ntBASIC19.34■□□□□ 0.69
TRIM50Q86XT4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM50Q86XT4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 LINC00304-203ENST00000565008 1864 ntBASIC19.33■□□□□ 0.69
TRIM50Q86XT4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 AL590787.1-201ENST00000568856 1315 ntBASIC19.33■□□□□ 0.69
TRIM50Q86XT4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM50Q86XT4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 ACTG1P4-201ENST00000425123 1122 ntBASIC19.33■□□□□ 0.68
TRIM50Q86XT4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 MTDHP5-201ENST00000598980 586 ntBASIC19.33■□□□□ 0.68
TRIM50Q86XT4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM50Q86XT4 PI4KAP1-204ENST00000612579 1703 ntBASIC19.33■□□□□ 0.68
TRIM50Q86XT4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms