Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC10.62□□□□□ -0.71
VPS13BQ7Z7G8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AC002056.1-201ENST00000395613 760 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AC004890.2-204ENST00000481968 304 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AC116407.2-201ENST00000613639 860 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AL590787.1-201ENST00000568856 1315 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 BICD1-207ENST00000551848 1962 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AL662799.1-202ENST00000614205 422 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 AL135999.2-201ENST00000622438 1686 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 COX5BP8-201ENST00000416911 349 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 KRT8P23-201ENST00000560090 1207 ntBASIC10.61□□□□□ -0.71
VPS13BQ7Z7G8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 GPR53P-205ENST00000457298 1084 ntBASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 AC027307.3-201ENST00000594262 1100 ntBASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 BSG-214ENST00000614867 960 ntTSL 3 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 PI4KAP1-204ENST00000612579 1703 ntBASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 AC125807.1-201ENST00000483097 614 ntBASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 IGHV3-71-201ENST00000523324 359 ntBASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms