Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 AC113404.2-201ENST00000507884 177 ntBASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 AC010203.1-204ENST00000548782 407 ntBASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 AC079602.3-201ENST00000623931 403 ntBASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 RASA4DP-201ENST00000460726 1199 ntBASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 AC034232.1-201ENST00000506026 1064 ntBASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCHD4Q6ZW05 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.02■□□□□ 0.15
PTCHD4Q6ZW05 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 AL441883.1-201ENST00000566170 1045 ntBASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms