Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 AC109462.3-201ENST00000573934 613 ntBASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 AC092329.2-201ENST00000598402 547 ntBASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 OR6D1P-202ENST00000641007 5290 ntBASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
NHLRC1Q6VVB1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 POM121L3P-201ENST00000419331 1163 ntBASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 AC012615.1-201ENST00000565797 1299 ntBASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NHLRC1Q6VVB1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 STK25P1-201ENST00000585406 838 ntBASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 AL118508.1-201ENST00000613502 2345 ntBASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 CICP6-201ENST00000457191 2729 ntBASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NHLRC1Q6VVB1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 AC016396.2-201ENST00000562575 1417 ntBASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 SLC25A1P3-201ENST00000395415 828 ntBASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.62■□□□□ 0.09
NHLRC1Q6VVB1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms