Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 AC006449.5-201ENST00000610658 2098 ntBASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 LYSMD4-203ENST00000378904 2122 ntBASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 NEK4P2-201ENST00000580004 1012 ntBASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 AC092119.3-201ENST00000612618 583 ntBASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 AC060834.1-201ENST00000443027 2032 ntBASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXR1Q6PIV2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 TSPY23P-201ENST00000440136 739 ntBASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.17■□□□□ 0.5
FOXR1Q6PIV2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 KRT18P55-202ENST00000578578 1546 ntBASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 AC024909.3-201ENST00000611513 2257 ntBASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXR1Q6PIV2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms