Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 HLA-B-256ENST00000639848 1089 ntBASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KCNIP4Q6PIL6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AC090192.1-201ENST00000517740 490 ntBASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 PRKY-204ENST00000533551 1019 ntBASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AC060766.5-201ENST00000590539 871 ntBASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AC006557.6-201ENST00000623071 864 ntBASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KCNIP4Q6PIL6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KCNIP4Q6PIL6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms