Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFWD3Q6PCD5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.14■□□□□ 0.5
RFWD3Q6PCD5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.14■□□□□ 0.5
RFWD3Q6PCD5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFWD3Q6PCD5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.14■□□□□ 0.5
RFWD3Q6PCD5 AL353593.2-201ENST00000602529 1483 ntBASIC18.14■□□□□ 0.5
RFWD3Q6PCD5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFWD3Q6PCD5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFWD3Q6PCD5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.14■□□□□ 0.5
RFWD3Q6PCD5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 AC079776.2-201ENST00000641154 1609 ntBASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 RNA5SP419-201ENST00000515908 135 ntBASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
RFWD3Q6PCD5 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 AD000864.1-201ENST00000624076 2295 ntBASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 AL031284.1-201ENST00000419297 478 ntBASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 AL049840.3-201ENST00000602669 611 ntBASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 AC064862.7-201ENST00000604520 867 ntBASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 AL139288.1-201ENST00000623748 933 ntBASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 PP12613-201ENST00000424958 2230 ntBASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFWD3Q6PCD5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 SPDYE21P-201ENST00000413323 827 ntBASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 RPS2P1-201ENST00000434010 821 ntBASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 AP001005.1-201ENST00000571755 1248 ntBASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 MTDHP4-201ENST00000600287 670 ntBASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 AC025062.2-201ENST00000605477 670 ntBASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD3Q6PCD5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms