Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 SPDYE7P-202ENST00000420373 878 ntBASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 LINC01225-203ENST00000563550 1244 ntBASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 AC026150.2-201ENST00000564693 1156 ntBASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 AL009183.1-201ENST00000603760 355 ntBASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 FO538757.1-201ENST00000623083 1397 ntBASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 UXT-AS1-201ENST00000590504 1525 ntBASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CNKSR3Q6P9H4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 MIR661-201ENST00000384842 89 ntBASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 TREML5P-201ENST00000421694 576 ntBASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 FAM207CP-201ENST00000443486 507 ntBASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 AC012645.4-201ENST00000610691 1061 ntBASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 AC084121.4-201ENST00000641598 221 ntBASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 AF228730.8-201ENST00000642140 221 ntBASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNKSR3Q6P9H4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 AC008677.1-201ENST00000519230 1561 ntBASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 SPDYE14P-201ENST00000442619 822 ntBASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 UGT1A2P-201ENST00000454886 866 ntBASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 IGHV3-42-201ENST00000520410 361 ntBASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 AC005225.4-201ENST00000557330 545 ntBASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 AC012569.1-201ENST00000591191 1524 ntBASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNKSR3Q6P9H4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNKSR3Q6P9H4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CNKSR3Q6P9H4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CNKSR3Q6P9H4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CNKSR3Q6P9H4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.52■□□□□ 0.55
CNKSR3Q6P9H4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms