Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 AL135999.2-201ENST00000622438 1686 ntBASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC62Q6P9F0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 AC004877.2-201ENST00000623941 599 ntBASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC62Q6P9F0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 AC046185.3-201ENST00000623228 1824 ntBASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 PDPK2P-202ENST00000562415 1191 ntBASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 MIR4469-201ENST00000583919 79 ntBASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC62Q6P9F0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 PI4KAP1-204ENST00000612579 1703 ntBASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 PMS2P2-201ENST00000425039 1128 ntBASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 HTR5BP-201ENST00000430851 1154 ntBASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 KRT19P2-202ENST00000557173 1012 ntBASIC19.48■□□□□ 0.71
CCDC62Q6P9F0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms