Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 PRYP5-201ENST00000451909 266 ntBASIC15.21■□□□□ 0.03
FAM27BQ5VT28 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
FAM27BQ5VT28 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FAM27BQ5VT28 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FAM27BQ5VT28 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
FAM27BQ5VT28 AC148477.5-201ENST00000625164 1645 ntBASIC15.21■□□□□ 0.02
FAM27BQ5VT28 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.21■□□□□ 0.02
FAM27BQ5VT28 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 ACTG1P4-201ENST00000425123 1122 ntBASIC15.2■□□□□ 0.02
FAM27BQ5VT28 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 LINC01711-201ENST00000598340 967 ntBASIC15.2■□□□□ 0.02
FAM27BQ5VT28 AL732292.2-201ENST00000609649 430 ntBASIC15.2■□□□□ 0.02
FAM27BQ5VT28 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FAM27BQ5VT28 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FAM27BQ5VT28 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms