Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 HMGA1P7-201ENST00000406908 502 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 IGHV3-62-201ENST00000520057 340 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 MIR4515-201ENST00000584082 81 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 MIR4259-201ENST00000584466 101 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 CHCHD2P3-201ENST00000603038 451 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 AC008738.7-201ENST00000609744 511 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.9□□□□□ -0.02
LRRK2Q5S007 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.9□□□□□ -0.02
LRRK2Q5S007 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.9□□□□□ -0.02
LRRK2Q5S007 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.9□□□□□ -0.02
LRRK2Q5S007 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.9□□□□□ -0.02
LRRK2Q5S007 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRK2Q5S007 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRK2Q5S007 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 ZNF890P-202ENST00000530367 1156 ntBASIC14.89□□□□□ -0.03
LRRK2Q5S007 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LRRK2Q5S007 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRK2Q5S007 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LRRK2Q5S007 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRK2Q5S007 AL023806.1-201ENST00000603994 1649 ntBASIC14.88□□□□□ -0.03
LRRK2Q5S007 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms