Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 MYCLP1-201ENST00000372451 1075 ntBASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 AF238378.1-201ENST00000526806 358 ntBASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC4Q5GLZ8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 AC108860.2-201ENST00000562760 2183 ntBASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 TERC-201ENST00000602385 541 ntBASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 AC114341.1-201ENST00000618070 349 ntBASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 AL023806.1-201ENST00000603994 1649 ntBASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HERC4Q5GLZ8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC4Q5GLZ8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 NUS1P2-201ENST00000417358 873 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms