Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 AF238378.1-201ENST00000526806 358 ntBASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 NKAPP1-205ENST00000585790 367 ntBASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 AC008608.2-201ENST00000606089 416 ntBASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN20Q4JDL3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 SAPCD2P3-201ENST00000455031 850 ntBASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 SART3-203ENST00000546611 1184 ntBASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PTPN20Q4JDL3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 AL356309.3-201ENST00000624132 1934 ntBASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN20Q4JDL3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 LINC02012-201ENST00000608206 1725 ntBASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 AL139288.1-201ENST00000623748 933 ntBASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 AC022211.2-201ENST00000585075 2527 ntBASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTPN20Q4JDL3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 AC092053.1-201ENST00000605787 1936 ntBASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 AC020916.1-201ENST00000587762 1774 ntBASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN20Q4JDL3 AC097637.2-201ENST00000624096 1997 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms