Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC173Q0VFZ6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 DDX43P3-201ENST00000441064 443 ntBASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 BX088651.1-201ENST00000540551 451 ntBASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 AC131212.4-201ENST00000623606 975 ntBASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC173Q0VFZ6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 AL445675.2-201ENST00000620291 557 ntBASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC173Q0VFZ6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC173Q0VFZ6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC173Q0VFZ6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms