Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKL1Q00532 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL1Q00532 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKL1Q00532 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL1Q00532 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDKL1Q00532 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.13■□□□□ 0.33
CDKL1Q00532 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.13■□□□□ 0.33
CDKL1Q00532 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKL1Q00532 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.13■□□□□ 0.33
CDKL1Q00532 AP002383.4-201ENST00000442518 975 ntBASIC17.13■□□□□ 0.33
CDKL1Q00532 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.13■□□□□ 0.33
CDKL1Q00532 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKL1Q00532 IGHV3-52-201ENST00000519770 353 ntBASIC17.13■□□□□ 0.33
CDKL1Q00532 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL1Q00532 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.13■□□□□ 0.33
CDKL1Q00532 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL1Q00532 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.13■□□□□ 0.33
CDKL1Q00532 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.13■□□□□ 0.33
CDKL1Q00532 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKL1Q00532 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL1Q00532 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 KRT18P1-202ENST00000452408 1331 ntBASIC17.13■□□□□ 0.33
CDKL1Q00532 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CDKL1Q00532 AC233702.3-201ENST00000578656 1387 ntBASIC17.13■□□□□ 0.33
CDKL1Q00532 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKL1Q00532 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL1Q00532 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL1Q00532 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL1Q00532 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.12■□□□□ 0.33
CDKL1Q00532 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKL1Q00532 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
CDKL1Q00532 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKL1Q00532 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKL1Q00532 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKL1Q00532 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
CDKL1Q00532 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL1Q00532 TPSP2-201ENST00000561760 610 ntBASIC17.12■□□□□ 0.33
CDKL1Q00532 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 AP005901.3-202ENST00000581653 237 ntBASIC17.12■□□□□ 0.33
CDKL1Q00532 AC011467.2-201ENST00000598425 242 ntBASIC17.12■□□□□ 0.33
CDKL1Q00532 Z69720.1-201ENST00000601483 472 ntBASIC17.12■□□□□ 0.33
CDKL1Q00532 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDKL1Q00532 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKL1Q00532 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL1Q00532 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKL1Q00532 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL1Q00532 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDKL1Q00532 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDKL1Q00532 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDKL1Q00532 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDKL1Q00532 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDKL1Q00532 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDKL1Q00532 AC091607.1-201ENST00000490318 1060 ntBASIC17.11■□□□□ 0.33
CDKL1Q00532 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.11■□□□□ 0.33
CDKL1Q00532 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKL1Q00532 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.11■□□□□ 0.33
CDKL1Q00532 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKL1Q00532 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKL1Q00532 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKL1Q00532 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKL1Q00532 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CDKL1Q00532 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDKL1Q00532 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL1Q00532 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms