Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM4P67936 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TPM4P67936 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.52■□□□□ 0.72
TPM4P67936 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.52■□□□□ 0.71
TPM4P67936 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
TPM4P67936 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
TPM4P67936 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TPM4P67936 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TPM4P67936 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
TPM4P67936 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TPM4P67936 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TPM4P67936 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TPM4P67936 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TPM4P67936 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
TPM4P67936 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.51■□□□□ 0.71
TPM4P67936 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TPM4P67936 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM4P67936 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.51■□□□□ 0.71
TPM4P67936 MIR718-201ENST00000390190 70 ntBASIC19.51■□□□□ 0.71
TPM4P67936 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.51■□□□□ 0.71
TPM4P67936 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 AC098590.1-201ENST00000468126 897 ntBASIC19.51■□□□□ 0.71
TPM4P67936 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 AC112698.1-201ENST00000510299 916 ntBASIC19.51■□□□□ 0.71
TPM4P67936 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TPM4P67936 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM4P67936 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM4P67936 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.51■□□□□ 0.71
TPM4P67936 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM4P67936 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.51■□□□□ 0.71
TPM4P67936 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TPM4P67936 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM4P67936 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
TPM4P67936 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
TPM4P67936 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM4P67936 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM4P67936 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM4P67936 TSPY12P-201ENST00000421279 868 ntBASIC19.5■□□□□ 0.71
TPM4P67936 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.5■□□□□ 0.71
TPM4P67936 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
TPM4P67936 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.5■□□□□ 0.71
TPM4P67936 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.5■□□□□ 0.71
TPM4P67936 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.5■□□□□ 0.71
TPM4P67936 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM4P67936 Z99916.2-201ENST00000604037 246 ntBASIC19.5■□□□□ 0.71
TPM4P67936 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM4P67936 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.5■□□□□ 0.71
TPM4P67936 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TPM4P67936 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TPM4P67936 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
TPM4P67936 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TPM4P67936 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM4P67936 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM4P67936 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.49■□□□□ 0.71
TPM4P67936 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 TSPY20P-201ENST00000450910 630 ntBASIC19.49■□□□□ 0.71
TPM4P67936 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.49■□□□□ 0.71
TPM4P67936 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TPM4P67936 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TPM4P67936 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
TPM4P67936 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TPM4P67936 FLJ38576-201ENST00000623820 2459 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms