Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VSX2P58304 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VSX2P58304 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.67■□□□□ 0.26
VSX2P58304 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
VSX2P58304 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.67■□□□□ 0.26
VSX2P58304 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VSX2P58304 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
VSX2P58304 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.66■□□□□ 0.26
VSX2P58304 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.66■□□□□ 0.26
VSX2P58304 AC068880.1-201ENST00000507289 2297 ntBASIC16.66■□□□□ 0.26
VSX2P58304 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 GNAS-203ENST00000306120 1878 ntBASIC16.66■□□□□ 0.26
VSX2P58304 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VSX2P58304 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.66■□□□□ 0.26
VSX2P58304 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.66■□□□□ 0.26
VSX2P58304 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
VSX2P58304 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.66■□□□□ 0.26
VSX2P58304 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.66■□□□□ 0.26
VSX2P58304 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.66■□□□□ 0.26
VSX2P58304 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.66■□□□□ 0.26
VSX2P58304 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VSX2P58304 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.66■□□□□ 0.26
VSX2P58304 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.66■□□□□ 0.26
VSX2P58304 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VSX2P58304 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.65■□□□□ 0.26
VSX2P58304 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.65■□□□□ 0.26
VSX2P58304 AC139713.2-201ENST00000641328 2723 ntBASIC16.65■□□□□ 0.26
VSX2P58304 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.65■□□□□ 0.26
VSX2P58304 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.65■□□□□ 0.26
VSX2P58304 RPS2P28-201ENST00000314255 741 ntBASIC16.65■□□□□ 0.26
VSX2P58304 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.65■□□□□ 0.26
VSX2P58304 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.65■□□□□ 0.26
VSX2P58304 PRYP5-201ENST00000451909 266 ntBASIC16.65■□□□□ 0.26
VSX2P58304 AC093909.1-201ENST00000504731 1122 ntBASIC16.65■□□□□ 0.26
VSX2P58304 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.65■□□□□ 0.26
VSX2P58304 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.65■□□□□ 0.26
VSX2P58304 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.65■□□□□ 0.26
VSX2P58304 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.65■□□□□ 0.26
VSX2P58304 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.65■□□□□ 0.26
VSX2P58304 AL139327.4-201ENST00000612362 153 ntBASIC16.65■□□□□ 0.26
VSX2P58304 FAM215A-202ENST00000632077 792 ntBASIC16.65■□□□□ 0.26
VSX2P58304 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.65■□□□□ 0.26
VSX2P58304 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.65■□□□□ 0.26
VSX2P58304 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.65■□□□□ 0.26
VSX2P58304 AC133963.1-201ENST00000504166 1679 ntBASIC16.65■□□□□ 0.26
VSX2P58304 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.65■□□□□ 0.26
VSX2P58304 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VSX2P58304 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
VSX2P58304 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
VSX2P58304 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
VSX2P58304 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
VSX2P58304 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 AC067852.2-201ENST00000590513 2313 ntBASIC16.64■□□□□ 0.25
VSX2P58304 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
VSX2P58304 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VSX2P58304 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.64■□□□□ 0.25
VSX2P58304 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
VSX2P58304 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.64■□□□□ 0.25
VSX2P58304 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.64■□□□□ 0.25
VSX2P58304 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.64■□□□□ 0.25
VSX2P58304 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VSX2P58304 RNA5SP419-201ENST00000515908 135 ntBASIC16.64■□□□□ 0.25
VSX2P58304 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
VSX2P58304 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.64■□□□□ 0.25
VSX2P58304 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VSX2P58304 AL049840.3-201ENST00000602669 611 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms