Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK7P50613 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK7P50613 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 AC002056.1-201ENST00000395613 760 ntBASIC19.12■□□□□ 0.65
CDK7P50613 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.12■□□□□ 0.65
CDK7P50613 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.12■□□□□ 0.65
CDK7P50613 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK7P50613 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.12■□□□□ 0.65
CDK7P50613 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.12■□□□□ 0.65
CDK7P50613 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.12■□□□□ 0.65
CDK7P50613 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.12■□□□□ 0.65
CDK7P50613 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDK7P50613 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDK7P50613 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CDK7P50613 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK7P50613 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CDK7P50613 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 AC067863.1-201ENST00000494933 530 ntBASIC19.11■□□□□ 0.65
CDK7P50613 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.11■□□□□ 0.65
CDK7P50613 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 AC069262.1-201ENST00000539058 672 ntBASIC19.11■□□□□ 0.65
CDK7P50613 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK7P50613 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK7P50613 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK7P50613 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
CDK7P50613 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK7P50613 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.1■□□□□ 0.65
CDK7P50613 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.1■□□□□ 0.65
CDK7P50613 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK7P50613 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK7P50613 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.1■□□□□ 0.65
CDK7P50613 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK7P50613 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.1■□□□□ 0.65
CDK7P50613 AL355306.1-201ENST00000415580 579 ntBASIC19.1■□□□□ 0.65
CDK7P50613 AL671277.1-201ENST00000429656 993 ntBASIC19.1■□□□□ 0.65
CDK7P50613 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.1■□□□□ 0.65
CDK7P50613 TIMM8BP1-201ENST00000452384 211 ntBASIC19.1■□□□□ 0.65
CDK7P50613 KRT8P48-201ENST00000515599 1220 ntBASIC19.1■□□□□ 0.65
CDK7P50613 AC190387.1-201ENST00000551683 408 ntBASIC19.1■□□□□ 0.65
CDK7P50613 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.1■□□□□ 0.65
CDK7P50613 AC099522.2-201ENST00000607001 744 ntBASIC19.1■□□□□ 0.65
CDK7P50613 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK7P50613 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK7P50613 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK7P50613 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK7P50613 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK7P50613 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK7P50613 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK7P50613 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK7P50613 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK7P50613 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK7P50613 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK7P50613 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK7P50613 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK7P50613 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms