Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PRIM2P49643 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.59■□□□□ 0.25
PRIM2P49643 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PRIM2P49643 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRIM2P49643 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRIM2P49643 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRIM2P49643 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRIM2P49643 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PRIM2P49643 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.58■□□□□ 0.24
PRIM2P49643 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.58■□□□□ 0.24
PRIM2P49643 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.58■□□□□ 0.24
PRIM2P49643 NTF6B-201ENST00000591913 560 ntBASIC16.58■□□□□ 0.24
PRIM2P49643 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PRIM2P49643 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PRIM2P49643 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.58■□□□□ 0.24
PRIM2P49643 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.58■□□□□ 0.24
PRIM2P49643 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PRIM2P49643 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PRIM2P49643 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PRIM2P49643 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.58■□□□□ 0.24
PRIM2P49643 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRIM2P49643 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.57■□□□□ 0.24
PRIM2P49643 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PRIM2P49643 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.57■□□□□ 0.24
PRIM2P49643 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 AL356309.3-201ENST00000624132 1934 ntBASIC16.57■□□□□ 0.24
PRIM2P49643 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PRIM2P49643 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.57■□□□□ 0.24
PRIM2P49643 AL121761.2-201ENST00000598007 1648 ntBASIC16.57■□□□□ 0.24
PRIM2P49643 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
PRIM2P49643 TSPY22P-201ENST00000427496 604 ntBASIC16.57■□□□□ 0.24
PRIM2P49643 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.57■□□□□ 0.24
PRIM2P49643 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.57■□□□□ 0.24
PRIM2P49643 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 AL121956.5-201ENST00000625261 221 ntBASIC16.57■□□□□ 0.24
PRIM2P49643 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PRIM2P49643 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.57■□□□□ 0.24
PRIM2P49643 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRIM2P49643 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PRIM2P49643 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.56■□□□□ 0.24
PRIM2P49643 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PRIM2P49643 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.56■□□□□ 0.24
PRIM2P49643 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PRIM2P49643 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.56■□□□□ 0.24
PRIM2P49643 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.56■□□□□ 0.24
PRIM2P49643 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.56■□□□□ 0.24
PRIM2P49643 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.56■□□□□ 0.24
PRIM2P49643 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.56■□□□□ 0.24
PRIM2P49643 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.56■□□□□ 0.24
PRIM2P49643 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
PRIM2P49643 AC011498.5-201ENST00000592027 486 ntBASIC16.56■□□□□ 0.24
PRIM2P49643 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.56■□□□□ 0.24
PRIM2P49643 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRIM2P49643 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms