Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC1A6P48664 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A6P48664 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLC1A6P48664 AC079328.2-201ENST00000561241 3354 ntBASIC17.12■□□□□ 0.33
SLC1A6P48664 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A6P48664 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A6P48664 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A6P48664 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC1A6P48664 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A6P48664 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A6P48664 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 RASA4DP-201ENST00000460726 1199 ntBASIC17.12■□□□□ 0.33
SLC1A6P48664 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A6P48664 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC1A6P48664 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A6P48664 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC1A6P48664 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC1A6P48664 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A6P48664 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC1A6P48664 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A6P48664 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SLC1A6P48664 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A6P48664 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A6P48664 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SLC1A6P48664 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC1A6P48664 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A6P48664 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A6P48664 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A6P48664 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A6P48664 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A6P48664 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC1A6P48664 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A6P48664 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A6P48664 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A6P48664 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 MTCL1P1-201ENST00000446207 792 ntBASIC17.11■□□□□ 0.33
SLC1A6P48664 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC1A6P48664 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC1A6P48664 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 AC141257.4-201ENST00000634557 245 ntBASIC17.11■□□□□ 0.33
SLC1A6P48664 AC136944.6-201ENST00000634818 245 ntBASIC17.11■□□□□ 0.33
SLC1A6P48664 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC1A6P48664 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SLC1A6P48664 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A6P48664 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A6P48664 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 LINC02199-201ENST00000506655 2702 ntBASIC17.11■□□□□ 0.33
SLC1A6P48664 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SLC1A6P48664 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A6P48664 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A6P48664 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 AC008741.2-201ENST00000612792 3115 ntBASIC17.1■□□□□ 0.33
SLC1A6P48664 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A6P48664 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A6P48664 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A6P48664 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 AC006449.5-201ENST00000610658 2098 ntBASIC17.1■□□□□ 0.33
SLC1A6P48664 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC1A6P48664 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.1■□□□□ 0.33
SLC1A6P48664 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms