Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.18■□□□□ 0.02
GDNFP39905 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GDNFP39905 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GDNFP39905 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GDNFP39905 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
GDNFP39905 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.17■□□□□ 0.02
GDNFP39905 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.17■□□□□ 0.02
GDNFP39905 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
GDNFP39905 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 ECEL1P3-201ENST00000427961 737 ntBASIC15.17■□□□□ 0.02
GDNFP39905 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GDNFP39905 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.17■□□□□ 0.02
GDNFP39905 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.17■□□□□ 0.02
GDNFP39905 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.17■□□□□ 0.02
GDNFP39905 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GDNFP39905 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 AC024243.1-201ENST00000609234 778 ntBASIC15.17■□□□□ 0.02
GDNFP39905 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GDNFP39905 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
GDNFP39905 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 LINC00554-201ENST00000564841 3011 ntBASIC15.17■□□□□ 0.02
GDNFP39905 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.17■□□□□ 0.02
GDNFP39905 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
GDNFP39905 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.17■□□□□ 0.02
GDNFP39905 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.17■□□□□ 0.02
GDNFP39905 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.17■□□□□ 0.02
GDNFP39905 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDNFP39905 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.16■□□□□ 0.02
GDNFP39905 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GDNFP39905 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.16■□□□□ 0.02
GDNFP39905 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 AC116353.5-201ENST00000638148 1699 ntBASIC15.16■□□□□ 0.02
GDNFP39905 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.16■□□□□ 0.02
GDNFP39905 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.16■□□□□ 0.02
GDNFP39905 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
GDNFP39905 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
GDNFP39905 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.16■□□□□ 0.02
GDNFP39905 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
GDNFP39905 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GDNFP39905 SEC1P-202ENST00000473944 940 ntBASIC15.16■□□□□ 0.02
GDNFP39905 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.16■□□□□ 0.02
GDNFP39905 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.16■□□□□ 0.02
GDNFP39905 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.16■□□□□ 0.02
GDNFP39905 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.16■□□□□ 0.02
GDNFP39905 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.16■□□□□ 0.02
GDNFP39905 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.16■□□□□ 0.02
GDNFP39905 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.16■□□□□ 0.02
GDNFP39905 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDNFP39905 AL138966.2-201ENST00000621997 464 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms