Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.84□□□□□ -0.35
CKS2P33552 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.84□□□□□ -0.35
CKS2P33552 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 GUSBP6-202ENST00000438529 1198 ntBASIC12.84□□□□□ -0.35
CKS2P33552 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.84□□□□□ -0.35
CKS2P33552 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.84□□□□□ -0.35
CKS2P33552 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.84□□□□□ -0.35
CKS2P33552 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.84□□□□□ -0.35
CKS2P33552 AL353708.3-201ENST00000610272 989 ntBASIC12.84□□□□□ -0.35
CKS2P33552 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CKS2P33552 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CKS2P33552 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.84□□□□□ -0.35
CKS2P33552 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CKS2P33552 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.84□□□□□ -0.35
CKS2P33552 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CKS2P33552 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CKS2P33552 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CKS2P33552 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.83□□□□□ -0.35
CKS2P33552 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CKS2P33552 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.83□□□□□ -0.36
CKS2P33552 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.83□□□□□ -0.36
CKS2P33552 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CKS2P33552 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.83□□□□□ -0.36
CKS2P33552 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CKS2P33552 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.83□□□□□ -0.36
CKS2P33552 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.83□□□□□ -0.36
CKS2P33552 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.83□□□□□ -0.36
CKS2P33552 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 AC069544.1-201ENST00000609399 999 ntBASIC12.83□□□□□ -0.36
CKS2P33552 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CKS2P33552 CR392000.1-201ENST00000624770 1228 ntBASIC12.83□□□□□ -0.36
CKS2P33552 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.83□□□□□ -0.36
CKS2P33552 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.83□□□□□ -0.36
CKS2P33552 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.83□□□□□ -0.36
CKS2P33552 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.83□□□□□ -0.36
CKS2P33552 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 AC116353.5-201ENST00000638148 1699 ntBASIC12.83□□□□□ -0.36
CKS2P33552 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.83□□□□□ -0.36
CKS2P33552 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CKS2P33552 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CKS2P33552 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.82□□□□□ -0.36
CKS2P33552 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS2P33552 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS2P33552 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS2P33552 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS2P33552 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS2P33552 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.82□□□□□ -0.36
CKS2P33552 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.82□□□□□ -0.36
CKS2P33552 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS2P33552 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS2P33552 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CKS2P33552 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms