Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HOXC8P31273 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC8P31273 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXC8P31273 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HOXC8P31273 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 TFAMP1-201ENST00000412727 736 ntBASIC18.79■□□□□ 0.6
HOXC8P31273 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXC8P31273 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC8P31273 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 AL512356.2-201ENST00000546955 174 ntBASIC18.79■□□□□ 0.6
HOXC8P31273 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXC8P31273 AL135744.1-201ENST00000565098 629 ntBASIC18.79■□□□□ 0.6
HOXC8P31273 RARRES2P8-201ENST00000566335 367 ntBASIC18.79■□□□□ 0.6
HOXC8P31273 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXC8P31273 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.79■□□□□ 0.6
HOXC8P31273 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXC8P31273 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXC8P31273 AC093512.1-201ENST00000617969 520 ntBASIC18.79■□□□□ 0.6
HOXC8P31273 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC8P31273 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC8P31273 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HOXC8P31273 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC8P31273 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HOXC8P31273 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HOXC8P31273 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC8P31273 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 GPS2P2-201ENST00000430745 888 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 BCRP1-201ENST00000444246 691 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 SPDYE11-202ENST00000450699 704 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXC8P31273 LINC01225-203ENST00000563550 1244 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 SPDYE9P-201ENST00000570642 692 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.78■□□□□ 0.6
HOXC8P31273 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXC8P31273 AL009183.1-201ENST00000603760 355 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 AL096865.1-201ENST00000606796 927 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 SPDYE10P-202ENST00000612005 668 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 SPDYE8P-202ENST00000612377 668 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 AC084121.4-201ENST00000641598 221 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 AF228730.8-201ENST00000642140 221 ntBASIC18.78■□□□□ 0.6
HOXC8P31273 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HOXC8P31273 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXC8P31273 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOXC8P31273 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
HOXC8P31273 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HOXC8P31273 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOXC8P31273 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC8P31273 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC8P31273 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
HOXC8P31273 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC8P31273 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HOXC8P31273 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HOXC8P31273 AC120498.9-201ENST00000339021 3867 ntBASIC18.77■□□□□ 0.6
HOXC8P31273 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC8P31273 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC8P31273 FAM58DP-201ENST00000428076 619 ntBASIC18.77■□□□□ 0.6
HOXC8P31273 AC069335.1-201ENST00000489972 472 ntBASIC18.77■□□□□ 0.6
HOXC8P31273 DUX4L17-201ENST00000557360 1267 ntBASIC18.77■□□□□ 0.6
HOXC8P31273 AC005498.2-205ENST00000593218 784 ntBASIC18.77■□□□□ 0.6
HOXC8P31273 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXC8P31273 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXC8P31273 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC8P31273 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXC8P31273 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC8P31273 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.77■□□□□ 0.59
HOXC8P31273 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC8P31273 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC8P31273 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.77■□□□□ 0.59
HOXC8P31273 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.77■□□□□ 0.59
HOXC8P31273 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC8P31273 EGFEM1P-202ENST00000431685 1563 ntBASIC18.76■□□□□ 0.59
HOXC8P31273 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HOXC8P31273 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms