Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.13■□□□□ 0.33
VARSP26640 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.13■□□□□ 0.33
VARSP26640 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VARSP26640 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VARSP26640 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.13■□□□□ 0.33
VARSP26640 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 CHCHD2P8-201ENST00000429873 447 ntBASIC17.13■□□□□ 0.33
VARSP26640 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VARSP26640 AC120057.1-201ENST00000483947 663 ntBASIC17.13■□□□□ 0.33
VARSP26640 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.13■□□□□ 0.33
VARSP26640 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.13■□□□□ 0.33
VARSP26640 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.13■□□□□ 0.33
VARSP26640 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.13■□□□□ 0.33
VARSP26640 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
VARSP26640 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VARSP26640 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
VARSP26640 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VARSP26640 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VARSP26640 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
VARSP26640 AP001094.4-201ENST00000579008 2176 ntBASIC17.12■□□□□ 0.33
VARSP26640 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VARSP26640 LINC00304-203ENST00000565008 1864 ntBASIC17.12■□□□□ 0.33
VARSP26640 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.12■□□□□ 0.33
VARSP26640 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VARSP26640 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VARSP26640 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 DDX43P3-201ENST00000441064 443 ntBASIC17.12■□□□□ 0.33
VARSP26640 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.12■□□□□ 0.33
VARSP26640 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.12■□□□□ 0.33
VARSP26640 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.12■□□□□ 0.33
VARSP26640 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.12■□□□□ 0.33
VARSP26640 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VARSP26640 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VARSP26640 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VARSP26640 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
VARSP26640 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.11■□□□□ 0.33
VARSP26640 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 AC092850.2-201ENST00000623821 2697 ntBASIC17.11■□□□□ 0.33
VARSP26640 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VARSP26640 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
VARSP26640 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.11■□□□□ 0.33
VARSP26640 AC091607.1-201ENST00000490318 1060 ntBASIC17.11■□□□□ 0.33
VARSP26640 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VARSP26640 GPALPP1-207ENST00000611650 899 ntBASIC17.11■□□□□ 0.33
VARSP26640 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms