Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL1P22362 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL1P22362 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCL1P22362 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL1P22362 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCL1P22362 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCL1P22362 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCL1P22362 DRAXINP1-201ENST00000437611 948 ntBASIC14.95□□□□□ -0.02
CCL1P22362 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 FAM86EP-206ENST00000510506 987 ntBASIC14.95□□□□□ -0.02
CCL1P22362 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.95□□□□□ -0.02
CCL1P22362 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.95□□□□□ -0.02
CCL1P22362 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL1P22362 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 FRMD8P1-201ENST00000440433 1524 ntBASIC14.95□□□□□ -0.02
CCL1P22362 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 AC092068.3-201ENST00000587894 2016 ntBASIC14.95□□□□□ -0.02
CCL1P22362 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CCL1P22362 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 GPR89P-201ENST00000407924 1495 ntBASIC14.95□□□□□ -0.02
CCL1P22362 TP73-AS1-210ENST00000637775 1455 ntBASIC14.95□□□□□ -0.02
CCL1P22362 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL1P22362 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL1P22362 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCL1P22362 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.95□□□□□ -0.02
CCL1P22362 AC078925.2-201ENST00000624013 1973 ntBASIC14.94□□□□□ -0.02
CCL1P22362 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CCL1P22362 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCL1P22362 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CCL1P22362 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CCL1P22362 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL1P22362 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL1P22362 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL1P22362 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL1P22362 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL1P22362 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.94□□□□□ -0.02
CCL1P22362 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 AC116407.4-201ENST00000623319 1061 ntBASIC14.94□□□□□ -0.02
CCL1P22362 AC073592.5-201ENST00000624854 528 ntBASIC14.94□□□□□ -0.02
CCL1P22362 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CCL1P22362 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 AC233702.3-201ENST00000578656 1387 ntBASIC14.94□□□□□ -0.02
CCL1P22362 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL1P22362 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CCL1P22362 INTS4P1-201ENST00000438455 1935 ntBASIC14.94□□□□□ -0.02
CCL1P22362 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL1P22362 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCL1P22362 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL1P22362 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms