Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SRFP11831 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRFP11831 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRFP11831 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SRFP11831 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 OR8S1-201ENST00000310194 1080 ntBASIC17.43■□□□□ 0.38
SRFP11831 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.43■□□□□ 0.38
SRFP11831 AC092580.3-201ENST00000430932 139 ntBASIC17.43■□□□□ 0.38
SRFP11831 AC241585.1-201ENST00000433527 519 ntBASIC17.43■□□□□ 0.38
SRFP11831 AC007274.1-201ENST00000439805 662 ntBASIC17.43■□□□□ 0.38
SRFP11831 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.43■□□□□ 0.38
SRFP11831 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.43■□□□□ 0.38
SRFP11831 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.43■□□□□ 0.38
SRFP11831 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.43■□□□□ 0.38
SRFP11831 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SRFP11831 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRFP11831 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFP11831 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.42■□□□□ 0.38
SRFP11831 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SRFP11831 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
SRFP11831 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFP11831 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SRFP11831 WASH6P-202ENST00000359512 1437 ntBASIC17.42■□□□□ 0.38
SRFP11831 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFP11831 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 PIN1P1-201ENST00000412108 996 ntBASIC17.42■□□□□ 0.38
SRFP11831 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFP11831 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 SERBP1P5-201ENST00000510079 1181 ntBASIC17.42■□□□□ 0.38
SRFP11831 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.42■□□□□ 0.38
SRFP11831 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SRFP11831 AC025048.6-201ENST00000634326 1161 ntBASIC17.42■□□□□ 0.38
SRFP11831 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFP11831 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.42■□□□□ 0.38
SRFP11831 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.42■□□□□ 0.38
SRFP11831 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFP11831 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFP11831 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.42■□□□□ 0.38
SRFP11831 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFP11831 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.42■□□□□ 0.38
SRFP11831 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SRFP11831 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SRFP11831 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.41■□□□□ 0.38
SRFP11831 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SRFP11831 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SRFP11831 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.41■□□□□ 0.38
SRFP11831 AC004890.2-204ENST00000481968 304 ntBASIC17.41■□□□□ 0.38
SRFP11831 MEIS3P1-201ENST00000495167 958 ntBASIC17.41■□□□□ 0.38
SRFP11831 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.41■□□□□ 0.38
SRFP11831 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.41■□□□□ 0.38
SRFP11831 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.41■□□□□ 0.38
SRFP11831 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.41■□□□□ 0.38
SRFP11831 SPDYE22P-201ENST00000582158 798 ntBASIC17.41■□□□□ 0.38
SRFP11831 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SRFP11831 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.41■□□□□ 0.38
SRFP11831 AL359881.2-201ENST00000602973 570 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms