Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13□□□□□ -0.33
SMIM17P0DL12 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13□□□□□ -0.33
SMIM17P0DL12 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SMIM17P0DL12 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 MESTP1-201ENST00000404287 994 ntBASIC13□□□□□ -0.33
SMIM17P0DL12 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 DUTP2-201ENST00000519164 463 ntBASIC13□□□□□ -0.33
SMIM17P0DL12 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13□□□□□ -0.33
SMIM17P0DL12 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13□□□□□ -0.33
SMIM17P0DL12 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13□□□□□ -0.33
SMIM17P0DL12 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
SMIM17P0DL12 AC112497.1-201ENST00000624824 639 ntBASIC13□□□□□ -0.33
SMIM17P0DL12 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SMIM17P0DL12 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
SMIM17P0DL12 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13□□□□□ -0.33
SMIM17P0DL12 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13□□□□□ -0.33
SMIM17P0DL12 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13□□□□□ -0.33
SMIM17P0DL12 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM17P0DL12 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
SMIM17P0DL12 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 PCDHB19P-201ENST00000570871 2371 ntBASIC12.99□□□□□ -0.33
SMIM17P0DL12 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 TSPY17P-201ENST00000450329 467 ntBASIC12.99□□□□□ -0.33
SMIM17P0DL12 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 NUDT16P1-203ENST00000513809 620 ntBASIC12.99□□□□□ -0.33
SMIM17P0DL12 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.99□□□□□ -0.33
SMIM17P0DL12 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SMIM17P0DL12 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms