Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.26■□□□□ 0.51
RB1P06400 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.26■□□□□ 0.51
RB1P06400 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.26■□□□□ 0.51
RB1P06400 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.26■□□□□ 0.51
RB1P06400 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.26■□□□□ 0.51
RB1P06400 SPDYE7P-202ENST00000420373 878 ntBASIC18.26■□□□□ 0.51
RB1P06400 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 AC125807.1-201ENST00000483097 614 ntBASIC18.26■□□□□ 0.51
RB1P06400 IGHV3-62-201ENST00000520057 340 ntBASIC18.26■□□□□ 0.51
RB1P06400 AC107918.2-201ENST00000530817 355 ntBASIC18.26■□□□□ 0.51
RB1P06400 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.26■□□□□ 0.51
RB1P06400 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.26■□□□□ 0.51
RB1P06400 DUX4L17-201ENST00000557360 1267 ntBASIC18.26■□□□□ 0.51
RB1P06400 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.26■□□□□ 0.51
RB1P06400 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.26■□□□□ 0.51
RB1P06400 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.26■□□□□ 0.51
RB1P06400 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RB1P06400 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RB1P06400 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RB1P06400 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RB1P06400 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RB1P06400 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.25■□□□□ 0.51
RB1P06400 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.25■□□□□ 0.51
RB1P06400 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RB1P06400 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.25■□□□□ 0.51
RB1P06400 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.25■□□□□ 0.51
RB1P06400 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.25■□□□□ 0.51
RB1P06400 SPCS2P4-201ENST00000436160 681 ntBASIC18.25■□□□□ 0.51
RB1P06400 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.25■□□□□ 0.51
RB1P06400 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.25■□□□□ 0.51
RB1P06400 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.25■□□□□ 0.51
RB1P06400 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.25■□□□□ 0.51
RB1P06400 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
RB1P06400 AC084121.4-201ENST00000641598 221 ntBASIC18.25■□□□□ 0.51
RB1P06400 AF228730.8-201ENST00000642140 221 ntBASIC18.25■□□□□ 0.51
RB1P06400 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RB1P06400 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RB1P06400 AC135776.1-201ENST00000319817 2481 ntBASIC18.25■□□□□ 0.51
RB1P06400 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RB1P06400 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RB1P06400 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RB1P06400 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.24■□□□□ 0.51
RB1P06400 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RB1P06400 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RB1P06400 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.24■□□□□ 0.51
RB1P06400 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
RB1P06400 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.24■□□□□ 0.51
RB1P06400 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.24■□□□□ 0.51
RB1P06400 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.24■□□□□ 0.51
RB1P06400 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RB1P06400 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.24■□□□□ 0.51
RB1P06400 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.24■□□□□ 0.51
RB1P06400 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.24■□□□□ 0.51
RB1P06400 LINC01225-203ENST00000563550 1244 ntBASIC18.24■□□□□ 0.51
RB1P06400 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RB1P06400 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.24■□□□□ 0.51
RB1P06400 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.24■□□□□ 0.51
RB1P06400 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.24■□□□□ 0.51
RB1P06400 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
RB1P06400 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RB1P06400 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
RB1P06400 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.24■□□□□ 0.51
RB1P06400 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RB1P06400 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RB1P06400 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RB1P06400 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.23■□□□□ 0.51
RB1P06400 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.23■□□□□ 0.51
RB1P06400 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.23■□□□□ 0.51
RB1P06400 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RB1P06400 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms