Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.85■□□□□ 0.93
CHGBP05060 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHGBP05060 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHGBP05060 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHGBP05060 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHGBP05060 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHGBP05060 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CHGBP05060 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.84■□□□□ 0.93
CHGBP05060 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.84■□□□□ 0.93
CHGBP05060 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.84■□□□□ 0.93
CHGBP05060 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.84■□□□□ 0.93
CHGBP05060 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.84■□□□□ 0.93
CHGBP05060 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.84■□□□□ 0.93
CHGBP05060 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.84■□□□□ 0.93
CHGBP05060 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.84■□□□□ 0.93
CHGBP05060 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.84■□□□□ 0.93
CHGBP05060 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHGBP05060 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CHGBP05060 AL356488.2-201ENST00000602755 427 ntBASIC20.84■□□□□ 0.93
CHGBP05060 AF228730.7-201ENST00000641842 219 ntBASIC20.84■□□□□ 0.93
CHGBP05060 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CHGBP05060 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 NCF1C-201ENST00000438382 1427 ntBASIC20.84■□□□□ 0.93
CHGBP05060 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHGBP05060 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CHGBP05060 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHGBP05060 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 AC116353.5-201ENST00000638148 1699 ntBASIC20.83■□□□□ 0.93
CHGBP05060 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CHGBP05060 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CHGBP05060 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHGBP05060 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.83■□□□□ 0.93
CHGBP05060 PTCHD3P3-201ENST00000403073 906 ntBASIC20.83■□□□□ 0.93
CHGBP05060 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.83■□□□□ 0.93
CHGBP05060 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
CHGBP05060 BX640515.1-201ENST00000617215 977 ntBASIC20.83■□□□□ 0.93
CHGBP05060 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHGBP05060 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CHGBP05060 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.83■□□□□ 0.92
CHGBP05060 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHGBP05060 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHGBP05060 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 AL022342.1-201ENST00000400363 863 ntBASIC20.82■□□□□ 0.92
CHGBP05060 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.82■□□□□ 0.92
CHGBP05060 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.82■□□□□ 0.92
CHGBP05060 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.82■□□□□ 0.92
CHGBP05060 RNA5SP415-201ENST00000517246 115 ntBASIC20.82■□□□□ 0.92
CHGBP05060 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.82■□□□□ 0.92
CHGBP05060 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.82■□□□□ 0.92
CHGBP05060 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.82■□□□□ 0.92
CHGBP05060 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.82■□□□□ 0.92
CHGBP05060 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHGBP05060 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHGBP05060 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHGBP05060 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHGBP05060 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
CHGBP05060 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHGBP05060 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CHGBP05060 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms