Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CICP6-201ENST00000457191 2729 ntBASIC15.67■□□□□ 0.1
HLA-DPB1P04440 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPB1P04440 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 RNF152P1-201ENST00000397754 604 ntBASIC15.66■□□□□ 0.1
HLA-DPB1P04440 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 TSPY5P-201ENST00000426936 936 ntBASIC15.66■□□□□ 0.1
HLA-DPB1P04440 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPB1P04440 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms