Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MT-ND1P03886 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-ND1P03886 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MT-ND1P03886 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
MT-ND1P03886 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-ND1P03886 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND1P03886 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-ND1P03886 MIR3917-201ENST00000580971 93 ntBASIC16.45■□□□□ 0.22
MT-ND1P03886 AC008687.5-201ENST00000593746 558 ntBASIC16.45■□□□□ 0.22
MT-ND1P03886 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.45■□□□□ 0.22
MT-ND1P03886 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-ND1P03886 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MT-ND1P03886 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MT-ND1P03886 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-ND1P03886 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.45■□□□□ 0.22
MT-ND1P03886 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND1P03886 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND1P03886 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.44■□□□□ 0.22
MT-ND1P03886 AP000523.1-201ENST00000398242 1049 ntBASIC16.44■□□□□ 0.22
MT-ND1P03886 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND1P03886 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND1P03886 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.44■□□□□ 0.22
MT-ND1P03886 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.44■□□□□ 0.22
MT-ND1P03886 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND1P03886 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND1P03886 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.44■□□□□ 0.22
MT-ND1P03886 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MT-ND1P03886 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MT-ND1P03886 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 AC016396.2-201ENST00000562575 1417 ntBASIC16.44■□□□□ 0.22
MT-ND1P03886 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND1P03886 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND1P03886 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.44■□□□□ 0.22
MT-ND1P03886 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MT-ND1P03886 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND1P03886 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND1P03886 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND1P03886 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
MT-ND1P03886 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
MT-ND1P03886 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MT-ND1P03886 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.43■□□□□ 0.22
MT-ND1P03886 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.43■□□□□ 0.22
MT-ND1P03886 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MT-ND1P03886 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MT-ND1P03886 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND1P03886 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.43■□□□□ 0.22
MT-ND1P03886 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms