Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC007613.1-201ENST00000572811 2597 ntBASIC20.75■□□□□ 0.91
COL1A1P02452 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A1P02452 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A1P02452 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.75■□□□□ 0.91
COL1A1P02452 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A1P02452 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.75■□□□□ 0.91
COL1A1P02452 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A1P02452 AL035633.1-201ENST00000406139 838 ntBASIC20.75■□□□□ 0.91
COL1A1P02452 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.75■□□□□ 0.91
COL1A1P02452 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A1P02452 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.75■□□□□ 0.91
COL1A1P02452 DUX4L17-201ENST00000557360 1267 ntBASIC20.75■□□□□ 0.91
COL1A1P02452 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.75■□□□□ 0.91
COL1A1P02452 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL1A1P02452 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.75■□□□□ 0.91
COL1A1P02452 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
COL1A1P02452 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.74■□□□□ 0.91
COL1A1P02452 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.74■□□□□ 0.91
COL1A1P02452 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.74■□□□□ 0.91
COL1A1P02452 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.74■□□□□ 0.91
COL1A1P02452 AC074386.1-202ENST00000463561 864 ntBASIC20.74■□□□□ 0.91
COL1A1P02452 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.74■□□□□ 0.91
COL1A1P02452 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.74■□□□□ 0.91
COL1A1P02452 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.74■□□□□ 0.91
COL1A1P02452 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.74■□□□□ 0.91
COL1A1P02452 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
COL1A1P02452 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A1P02452 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL1A1P02452 EGFEM1P-202ENST00000431685 1563 ntBASIC20.73■□□□□ 0.91
COL1A1P02452 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL1A1P02452 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A1P02452 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.73■□□□□ 0.91
COL1A1P02452 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A1P02452 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 AL139400.1-201ENST00000366220 510 ntBASIC20.73■□□□□ 0.91
COL1A1P02452 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.73■□□□□ 0.91
COL1A1P02452 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.73■□□□□ 0.91
COL1A1P02452 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A1P02452 AC099522.2-201ENST00000607001 744 ntBASIC20.73■□□□□ 0.91
COL1A1P02452 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
COL1A1P02452 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.73■□□□□ 0.91
COL1A1P02452 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A1P02452 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A1P02452 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A1P02452 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COL1A1P02452 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.72■□□□□ 0.91
COL1A1P02452 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.72■□□□□ 0.91
COL1A1P02452 AC004835.2-201ENST00000603762 682 ntBASIC20.72■□□□□ 0.91
COL1A1P02452 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COL1A1P02452 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
COL1A1P02452 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A1P02452 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COL1A1P02452 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.71■□□□□ 0.91
COL1A1P02452 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL1A1P02452 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A1P02452 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A1P02452 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
COL1A1P02452 AL513480.1-201ENST00000451731 511 ntBASIC20.71■□□□□ 0.91
COL1A1P02452 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.71■□□□□ 0.91
COL1A1P02452 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.71■□□□□ 0.91
COL1A1P02452 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.71■□□□□ 0.91
COL1A1P02452 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A1P02452 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A1P02452 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL1A1P02452 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms