Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.11□□□□□ -0.31
LTAP01374 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.11□□□□□ -0.31
LTAP01374 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.11□□□□□ -0.31
LTAP01374 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LTAP01374 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.11□□□□□ -0.31
LTAP01374 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.11□□□□□ -0.31
LTAP01374 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 UNC93B2-201ENST00000285383 730 ntBASIC13.11□□□□□ -0.31
LTAP01374 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 RPS2P55-201ENST00000397318 883 ntBASIC13.11□□□□□ -0.31
LTAP01374 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LTAP01374 AC009947.2-201ENST00000444014 672 ntBASIC13.11□□□□□ -0.31
LTAP01374 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.11□□□□□ -0.31
LTAP01374 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.11□□□□□ -0.31
LTAP01374 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.11□□□□□ -0.31
LTAP01374 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 AC107956.1-201ENST00000494359 873 ntBASIC13.11□□□□□ -0.31
LTAP01374 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.11□□□□□ -0.31
LTAP01374 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.11□□□□□ -0.31
LTAP01374 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.11□□□□□ -0.31
LTAP01374 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.11□□□□□ -0.31
LTAP01374 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LTAP01374 AC026471.5-201ENST00000615068 467 ntBASIC13.11□□□□□ -0.31
LTAP01374 AC068418.2-201ENST00000577309 3703 ntBASIC13.11□□□□□ -0.31
LTAP01374 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 FER1L4-210ENST00000615531 5998 ntBASIC13.11□□□□□ -0.31
LTAP01374 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.11□□□□□ -0.31
LTAP01374 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.11□□□□□ -0.31
LTAP01374 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
LTAP01374 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
LTAP01374 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LTAP01374 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
LTAP01374 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LTAP01374 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.11□□□□□ -0.31
LTAP01374 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.1□□□□□ -0.31
LTAP01374 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.1□□□□□ -0.31
LTAP01374 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.1□□□□□ -0.31
LTAP01374 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
LTAP01374 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LTAP01374 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.1□□□□□ -0.31
LTAP01374 AC012618.2-201ENST00000428058 849 ntBASIC13.1□□□□□ -0.31
LTAP01374 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 NEK4P2-201ENST00000580004 1012 ntBASIC13.1□□□□□ -0.31
LTAP01374 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 AC024563.2-201ENST00000603282 481 ntBASIC13.1□□□□□ -0.31
LTAP01374 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.1□□□□□ -0.31
LTAP01374 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 AL157888.1-201ENST00000631930 593 ntBASIC13.1□□□□□ -0.31
LTAP01374 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LTAP01374 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
LTAP01374 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.1□□□□□ -0.31
LTAP01374 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms