Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL009183.1-201ENST00000603760 355 ntBASIC17.32■□□□□ 0.36
PDGFBP01127 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 SPDYE12P-201ENST00000618416 771 ntBASIC17.32■□□□□ 0.36
PDGFBP01127 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.32■□□□□ 0.36
PDGFBP01127 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFBP01127 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFBP01127 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.32■□□□□ 0.36
PDGFBP01127 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFBP01127 AL135999.2-201ENST00000622438 1686 ntBASIC17.32■□□□□ 0.36
PDGFBP01127 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PDGFBP01127 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
PDGFBP01127 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFBP01127 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 MYCLP1-201ENST00000372451 1075 ntBASIC17.31■□□□□ 0.36
PDGFBP01127 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFBP01127 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.31■□□□□ 0.36
PDGFBP01127 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PDGFBP01127 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PDGFBP01127 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.31■□□□□ 0.36
PDGFBP01127 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 AL096828.2-201ENST00000567259 1965 ntBASIC17.31■□□□□ 0.36
PDGFBP01127 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFBP01127 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
PDGFBP01127 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFBP01127 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 AC079776.1-201ENST00000401540 1152 ntBASIC17.3■□□□□ 0.36
PDGFBP01127 INE1-201ENST00000456273 945 ntBASIC17.3■□□□□ 0.36
PDGFBP01127 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFBP01127 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.3■□□□□ 0.36
PDGFBP01127 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFBP01127 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.3■□□□□ 0.36
PDGFBP01127 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.3■□□□□ 0.36
PDGFBP01127 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PDGFBP01127 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.3■□□□□ 0.36
PDGFBP01127 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.3■□□□□ 0.36
PDGFBP01127 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDGFBP01127 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.29■□□□□ 0.36
PDGFBP01127 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDGFBP01127 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDGFBP01127 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDGFBP01127 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PDGFBP01127 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDGFBP01127 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.29■□□□□ 0.36
PDGFBP01127 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PDGFBP01127 ACA64.2-201ENST00000459014 129 ntBASIC17.29■□□□□ 0.36
PDGFBP01127 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.29■□□□□ 0.36
PDGFBP01127 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PDGFBP01127 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.29■□□□□ 0.36
PDGFBP01127 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PDGFBP01127 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.29■□□□□ 0.36
PDGFBP01127 AC027307.2-201ENST00000591252 911 ntBASIC17.29■□□□□ 0.36
PDGFBP01127 AL138828.2-201ENST00000615812 383 ntBASIC17.29■□□□□ 0.36
PDGFBP01127 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms