Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KDM4BO94953 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KDM4BO94953 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KDM4BO94953 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
KDM4BO94953 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
KDM4BO94953 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.33■□□□□ 0.05
KDM4BO94953 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
KDM4BO94953 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
KDM4BO94953 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
KDM4BO94953 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KDM4BO94953 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
KDM4BO94953 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM4BO94953 HLA-J-201ENST00000462773 1622 ntBASIC15.33■□□□□ 0.04
KDM4BO94953 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM4BO94953 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM4BO94953 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM4BO94953 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.33■□□□□ 0.04
KDM4BO94953 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.33■□□□□ 0.04
KDM4BO94953 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM4BO94953 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.33■□□□□ 0.04
KDM4BO94953 AC141257.4-201ENST00000634557 245 ntBASIC15.33■□□□□ 0.04
KDM4BO94953 AC136944.6-201ENST00000634818 245 ntBASIC15.33■□□□□ 0.04
KDM4BO94953 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
KDM4BO94953 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
KDM4BO94953 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KDM4BO94953 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
KDM4BO94953 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KDM4BO94953 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM4BO94953 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
KDM4BO94953 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KDM4BO94953 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KDM4BO94953 AC126755.1-201ENST00000525846 6405 ntBASIC15.32■□□□□ 0.04
KDM4BO94953 PCDHB19P-201ENST00000570871 2371 ntBASIC15.32■□□□□ 0.04
KDM4BO94953 LINC00554-201ENST00000564841 3011 ntBASIC15.32■□□□□ 0.04
KDM4BO94953 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
KDM4BO94953 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.32■□□□□ 0.04
KDM4BO94953 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 AC093827.2-201ENST00000512654 315 ntBASIC15.32■□□□□ 0.04
KDM4BO94953 AL157888.1-201ENST00000631930 593 ntBASIC15.32■□□□□ 0.04
KDM4BO94953 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KDM4BO94953 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KDM4BO94953 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.32■□□□□ 0.04
KDM4BO94953 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KDM4BO94953 AGGF1P2-201ENST00000426656 2106 ntBASIC15.32■□□□□ 0.04
KDM4BO94953 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KDM4BO94953 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM4BO94953 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM4BO94953 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM4BO94953 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
KDM4BO94953 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.31■□□□□ 0.04
KDM4BO94953 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KDM4BO94953 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms