Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.18■□□□□ 0.5
OPHN1O60890 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
OPHN1O60890 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
OPHN1O60890 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.18■□□□□ 0.5
OPHN1O60890 MIR574-201ENST00000385209 96 ntBASIC18.18■□□□□ 0.5
OPHN1O60890 NUS1P2-201ENST00000417358 873 ntBASIC18.18■□□□□ 0.5
OPHN1O60890 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.18■□□□□ 0.5
OPHN1O60890 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.18■□□□□ 0.5
OPHN1O60890 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 AL592071.1-201ENST00000611956 408 ntBASIC18.18■□□□□ 0.5
OPHN1O60890 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.18■□□□□ 0.5
OPHN1O60890 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 IL9RP2-201ENST00000423948 1312 ntBASIC18.18■□□□□ 0.5
OPHN1O60890 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.18■□□□□ 0.5
OPHN1O60890 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 REXO1L11P-201ENST00000620964 1927 ntBASIC18.17■□□□□ 0.5
OPHN1O60890 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.17■□□□□ 0.5
OPHN1O60890 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
OPHN1O60890 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
OPHN1O60890 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.17■□□□□ 0.5
OPHN1O60890 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.17■□□□□ 0.5
OPHN1O60890 MTCL1P1-201ENST00000446207 792 ntBASIC18.17■□□□□ 0.5
OPHN1O60890 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
OPHN1O60890 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.17■□□□□ 0.5
OPHN1O60890 AL773604.1-201ENST00000617417 272 ntBASIC18.17■□□□□ 0.5
OPHN1O60890 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.17■□□□□ 0.5
OPHN1O60890 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.17■□□□□ 0.5
OPHN1O60890 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 NSUN5P1-202ENST00000421140 1535 ntBASIC18.17■□□□□ 0.5
OPHN1O60890 NSUN5P2-203ENST00000457352 1529 ntBASIC18.17■□□□□ 0.5
OPHN1O60890 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OPHN1O60890 PP12613-201ENST00000424958 2230 ntBASIC18.17■□□□□ 0.5
OPHN1O60890 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.16■□□□□ 0.5
OPHN1O60890 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
OPHN1O60890 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.16■□□□□ 0.5
OPHN1O60890 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
OPHN1O60890 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 AC068472.1-201ENST00000474589 881 ntBASIC18.16■□□□□ 0.5
OPHN1O60890 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.16■□□□□ 0.5
OPHN1O60890 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.16■□□□□ 0.5
OPHN1O60890 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.16■□□□□ 0.5
OPHN1O60890 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.16■□□□□ 0.5
OPHN1O60890 AF238378.1-201ENST00000526806 358 ntBASIC18.16■□□□□ 0.5
OPHN1O60890 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.16■□□□□ 0.5
OPHN1O60890 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
OPHN1O60890 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.16■□□□□ 0.5
OPHN1O60890 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.16■□□□□ 0.5
OPHN1O60890 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
OPHN1O60890 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
OPHN1O60890 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.16■□□□□ 0.5
OPHN1O60890 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.16■□□□□ 0.5
OPHN1O60890 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.16■□□□□ 0.5
OPHN1O60890 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OPHN1O60890 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms