Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PLOD3O60568 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.43■□□□□ 0.22
PLOD3O60568 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PLOD3O60568 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 AL139384.1-201ENST00000612143 3047 ntBASIC16.42■□□□□ 0.22
PLOD3O60568 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.42■□□□□ 0.22
PLOD3O60568 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.42■□□□□ 0.22
PLOD3O60568 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.42■□□□□ 0.22
PLOD3O60568 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 POM121L3P-201ENST00000419331 1163 ntBASIC16.42■□□□□ 0.22
PLOD3O60568 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PLOD3O60568 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 AP000867.3-201ENST00000524675 377 ntBASIC16.42■□□□□ 0.22
PLOD3O60568 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 AL139327.4-201ENST00000612362 153 ntBASIC16.42■□□□□ 0.22
PLOD3O60568 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PLOD3O60568 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.42■□□□□ 0.22
PLOD3O60568 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.42■□□□□ 0.22
PLOD3O60568 AL049757.1-201ENST00000616842 1596 ntBASIC16.42■□□□□ 0.22
PLOD3O60568 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PLOD3O60568 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.42■□□□□ 0.22
PLOD3O60568 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.41■□□□□ 0.22
PLOD3O60568 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 SIRPAP1-201ENST00000448467 1770 ntBASIC16.41■□□□□ 0.22
PLOD3O60568 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PLOD3O60568 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
PLOD3O60568 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PLOD3O60568 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PLOD3O60568 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.41■□□□□ 0.22
PLOD3O60568 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 IGHV3-52-201ENST00000519770 353 ntBASIC16.41■□□□□ 0.22
PLOD3O60568 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 AC074051.2-201ENST00000565115 352 ntBASIC16.41■□□□□ 0.22
PLOD3O60568 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.41■□□□□ 0.22
PLOD3O60568 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.41■□□□□ 0.22
PLOD3O60568 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.41■□□□□ 0.22
PLOD3O60568 AC093458.2-201ENST00000623150 629 ntBASIC16.41■□□□□ 0.22
PLOD3O60568 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.41■□□□□ 0.22
PLOD3O60568 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.41■□□□□ 0.22
PLOD3O60568 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PLOD3O60568 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.41■□□□□ 0.22
PLOD3O60568 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PLOD3O60568 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 PP12613-201ENST00000424958 2230 ntBASIC16.41■□□□□ 0.22
PLOD3O60568 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PLOD3O60568 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.4■□□□□ 0.22
PLOD3O60568 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PLOD3O60568 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.4■□□□□ 0.22
PLOD3O60568 LYSMD4-203ENST00000378904 2122 ntBASIC16.4■□□□□ 0.22
PLOD3O60568 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.4■□□□□ 0.22
PLOD3O60568 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PLOD3O60568 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PLOD3O60568 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PLOD3O60568 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.4■□□□□ 0.22
PLOD3O60568 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms