Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCMT2O60294 AL023806.1-201ENST00000603994 1649 ntBASIC16.63■□□□□ 0.25
LCMT2O60294 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.63■□□□□ 0.25
LCMT2O60294 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.62■□□□□ 0.25
LCMT2O60294 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.62■□□□□ 0.25
LCMT2O60294 AC064862.7-201ENST00000604520 867 ntBASIC16.62■□□□□ 0.25
LCMT2O60294 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.62■□□□□ 0.25
LCMT2O60294 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LCMT2O60294 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
LCMT2O60294 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 AC097637.2-201ENST00000624096 1997 ntBASIC16.62■□□□□ 0.25
LCMT2O60294 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
LCMT2O60294 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCMT2O60294 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
LCMT2O60294 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LCMT2O60294 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LCMT2O60294 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.61■□□□□ 0.25
LCMT2O60294 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.61■□□□□ 0.25
LCMT2O60294 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LCMT2O60294 SLC25A1P3-201ENST00000395415 828 ntBASIC16.61■□□□□ 0.25
LCMT2O60294 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.61■□□□□ 0.25
LCMT2O60294 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.61■□□□□ 0.25
LCMT2O60294 SCARNA2-201ENST00000458748 420 ntBASIC16.61■□□□□ 0.25
LCMT2O60294 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.61■□□□□ 0.25
LCMT2O60294 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.61■□□□□ 0.25
LCMT2O60294 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.61■□□□□ 0.25
LCMT2O60294 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.61■□□□□ 0.25
LCMT2O60294 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LCMT2O60294 MTDHP4-201ENST00000600287 670 ntBASIC16.61■□□□□ 0.25
LCMT2O60294 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.61■□□□□ 0.25
LCMT2O60294 AL121894.2-201ENST00000602977 491 ntBASIC16.61■□□□□ 0.25
LCMT2O60294 AL022326.1-202ENST00000641533 845 ntBASIC16.61■□□□□ 0.25
LCMT2O60294 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.61■□□□□ 0.25
LCMT2O60294 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.61■□□□□ 0.25
LCMT2O60294 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.61■□□□□ 0.25
LCMT2O60294 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCMT2O60294 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LCMT2O60294 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.6■□□□□ 0.25
LCMT2O60294 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LCMT2O60294 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 AC116353.5-201ENST00000638148 1699 ntBASIC16.6■□□□□ 0.25
LCMT2O60294 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LCMT2O60294 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.6■□□□□ 0.25
LCMT2O60294 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCMT2O60294 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms