Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.68■□□□□ 0.42
RIPK2O43353 AL136038.4-201ENST00000603606 1261 ntBASIC17.68■□□□□ 0.42
RIPK2O43353 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.68■□□□□ 0.42
RIPK2O43353 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.68■□□□□ 0.42
RIPK2O43353 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RIPK2O43353 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.68■□□□□ 0.42
RIPK2O43353 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RIPK2O43353 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.67■□□□□ 0.42
RIPK2O43353 MTCL1P1-201ENST00000446207 792 ntBASIC17.67■□□□□ 0.42
RIPK2O43353 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RIPK2O43353 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.67■□□□□ 0.42
RIPK2O43353 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
RIPK2O43353 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RIPK2O43353 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RIPK2O43353 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RIPK2O43353 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.66■□□□□ 0.42
RIPK2O43353 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RIPK2O43353 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.66■□□□□ 0.42
RIPK2O43353 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 AL513523.2-202ENST00000427283 2040 ntBASIC17.66■□□□□ 0.42
RIPK2O43353 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RIPK2O43353 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
RIPK2O43353 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 COX5BP2-201ENST00000392354 334 ntBASIC17.66■□□□□ 0.42
RIPK2O43353 KRT18P48-201ENST00000434763 852 ntBASIC17.66■□□□□ 0.42
RIPK2O43353 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.66■□□□□ 0.42
RIPK2O43353 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.66■□□□□ 0.42
RIPK2O43353 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
RIPK2O43353 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RIPK2O43353 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RIPK2O43353 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RIPK2O43353 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 AC010460.3-201ENST00000511359 1579 ntBASIC17.66■□□□□ 0.42
RIPK2O43353 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIPK2O43353 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms